Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015833744.1_cds_XP_016505384.1_18729
CDS Infomation

[gene=LOC107823267] [db_xref=GeneID:107823267] [protein=tubulin alpha-3 chain] [protein_id=XP_016505384.1] [location=complement(join(15367..16023,16114..16484,16571..16805,17803..17895))] [gbkey=CDS]
Sequence

ATGAGAGAGTGCATTTCAATCCACATTGGCCAGGCCGGTATTCAGGTCGGAAATGCATGC
TGGGAACTTTACTGCCTCGAACATGGCATTCAGCCTGATGGCCAGATGCCGGGTGACAAG
ACTATTGGAGGTGGTGATGATGCATTCAACACCTTCTTCAGTGAAACTGGAGCTGGAAAG
CATGTTCCACGTGCTGTTTTTGTAGATCTTGAGCCTACTGTCATTGATGAAGTCAGGACG
GGAACATACAGACAGCTCTTTCACCCTGAGCAGCTCATCAGTGGCAAAGAAGATGCAGCC
AACAACTTCGCCCGTGGCCACTATACAATTGGGAAAGAAATAGTTGATCTTTGTTTGGAC
CGCATTAGGAAGCTTGCAGACAACTGCACTGGCCTTCAAGGTTTTCTGGTTTTCAATGCT
GTTGGTGGTGGCACTGGTTCTGGCCTTGGGTCACTTCTACTGGAACGTCTCTCAGTTGAC
TATGGCAAGAAATCAAAACTTGGATTCACAATTTATCCCTCACCACAGGTCTCAACGTCT
GTTGTGGAGCCTTACAACAGTGTGCTTTCAACTCACTCGCTGCTTGAGCACACAGATGTT
GCAATTCTTCTTGACAATGAGGCCATTTATGACATTTGCAGGCGGTCACTGGACATTGAG
CGCCCCACTTACACCAACCTTAACCGCCTTATTTCACAAGTCATTTCTTCTCTGACTGCT
TCTTTGAGGTTCGATGGAGCCTTGAATGTTGATGTGAATGAATTCCAGACCAACCTTGTA
CCATATCCCAGAATCCATTTTATGCTTTCCTCCTATGCTCCAGTCATTTCAGCTGAGAAG
GCTTACCATGAGCAGCTCTCAGTAGCAGAGATCACAAACAGTGCCTTTGAACCCTCTTCT
ATGATGGTTAAGTGTGATCCTCGCCACGGTAAGTACATGGCTTGCTGCCTGATGTTCCGT
GGTGATGTTGTGCCAAAGGATGTCAATGCTGCTGTGGCCACCATCAAGACCAAGCGTACT
ATCCAATTTGTTGACTGGTGCCCTACTGGATTCAAGTGTGGTATCAACTACCAACCACCA
ACTGTTGTCCCTGGAGGTGACCTTGCCAAGGTGCAAAGAGCTGTGTGCATGATCTCTAAC
TCAACCAGTGTTGCTGAGGTCTTCTCGCGCATTGATCACAAGTTTGATCTGATGTACGCC
AAGCGTGCTTTTGTGCATTGGTACGTGGGTGAGGGTATGGAGGAAGGCGAGTTCAGTGAA
GCACGTGAGGACCTTGCTGCTCTGGAAAAGGATTATGAGGAGGTTGGTGCTGAAGTTGAC
GATGAAGAAGGGGGTGATGAAGGAGATGAGTATTGA

Peptide Sequence

PEP ID

XP_016505384.1
PEP Infomation

PREDICTED: tubulin alpha-3 chain [Nicotiana tabacum]
Sequence

MRECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMPGDKTIGGGDDAFNTFFSETGAGK
HVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTIGKEIVDLCLD
RIRKLADNCTGLQGFLVFNAVGGGTGSGLGSLLLERLSVDYGKKSKLGFTIYPSPQVSTS
VVEPYNSVLSTHSLLEHTDVAILLDNEAIYDICRRSLDIERPTYTNLNRLISQVISSLTA
SLRFDGALNVDVNEFQTNLVPYPRIHFMLSSYAPVISAEKAYHEQLSVAEITNSAFEPSS
MMVKCDPRHGKYMACCLMFRGDVVPKDVNAAVATIKTKRTIQFVDWCPTGFKCGINYQPP
TVVPGGDLAKVQRAVCMISNSTSVAEVFSRIDHKFDLMYAKRAFVHWYVGEGMEEGEFSE
AREDLAALEKDYEEVGAEVDDEEGGDEGDEY

Transcript Sequence

Gene sequence data has not been registered.